Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790570.1_cds_XP_016502333.1_1508
CDS Infomation

[gene=LOC107820538] [db_xref=GeneID:107820538] [protein=mRNA-capping enzyme-like isoform X2] [protein_id=XP_016502333.1] [location=join(59956..60103,66042..66193,67359..67442,67519..67581,67724..67855,67928..68098,69286..69399,69748..69797,70403..70565,70681..70818,71583..71705,71784..71882,73235..73324,73495..73579,73855..73985,74065..74205)] [gbkey=CDS]
Sequence

ATGGAAGTAGTAGAAGGAGAACAATTGAAGAAAAGGAAGCAATTTGGCGAATATTCAATG
CACGTCTCTTCCTCTTCTACGCATAATAATTGGCGATCTCGCTATTATAAACCTCGCAAG
TTTTTCGACCGTTATAGCCTACCTTCAGGTTGGTTATATTGCCCTCCATATGGTGATAAC
ATAGGTTTTATTATCCCATCAAAAGTGCCTTTAAGTGAATCATTCGACAAGAACATCCCT
CCTGGAGAAAGATACACCCCAAAAGAATTAATCGACAAGCAAAGATGTTTAGGAAGAGAA
ATAGGACTGGTGGTTGATTTAACAAACACTGACCGTTACTATCCAGAATCAGATTGGACC
AGTCATGATATTAGACATGTTAAGATTCGATGCCCGGGACAGGACTCTGTACCTGATGCT
GAATCTGTAGATAGATTTGTTTCTGAGATCGTGCAATTTACATGTCAAGAATCTCAAGCA
AGCAAGTATGCTGTTGTCCACTGCACTCACGGTCACAACCGAACAGGATATATGATTGTA
CATTTTCTCGTACGTAATCAGTCAGTTAGTGTTAGTGAGGCAATAGCAATATTTTCCCGA
GCACGCCCTCCTGGAATTTACAGACAGAAGTATGTTGAAGCATTATATGACTTTTATTTG
CAAGCAAAGCCTGAACCTCTCGTTTGTCCCCAAACTCCAGAATGGAAGAGAGATGCTGAT
CAAGATAATGATGCTGTTGCTTCTTCTTCTGGGAATCTTACAAAAGCAGGAGCTATGTCA
GATGCAGATTTTGGGGGCGAACCTATCCCATTTGCAGAGGTTCAGAGGATGAAGAACTTC
TGCTATCAAGTGCTTAATTTGCATGCAAGGAGTAATACCCGAAGTCCAGGATCACACTCG
GTCTCTCTCAACAGGGACAAATTGCATCTTTTGAGCCAGCAACTCTACCATGTCACCTGG
AGTGCTGAGGGGCCACGATACATGATGCTAATAGATAGAGAGGGTTGTTATTTGATTGAT
ACACAGTTCTATTTCAGGAAGGTTCAGTTGCGGTTTCCTTGCAAATATATCTATCAGGGT
AGAGCTGACGTTACTCATCGCTACACGTTACTTGATGGTGAAATGGTTACTGAGACTGAG
CCAGAGACACAAGTGAAGAGGACTATTTACCTCATTTATGATATGATAGCAATTGATGAA
TCCTCTGTTTCAGAGCTACCTTTCCACCATAGGTTAATGCTAATTGAAGACGAGGTGATC
CGACCCCGAAACTTCGAACGTGAATTCTTATTCACATGTGTAAATCCATACTACCAATAT
GACATGGAACCATTTGAAGTGAGGAGGAAGGATTTCTATTTGATGTCTGCAGCTTCTAAG
CTGATCAAAGATATAACGCCAAGTCTTCCACATTCAACTGATGGTCTTATCTTTCAGGCC
TGGAATGCAACTTATGTGCCTTGTGAACATGATGGGCGCCTGAAATGGAAATATCCCGGA
AAGAATACTGTTGATTTTCTCTTTGAGGTGGGAGTCGACGGTAGCAATTTGCTTTATCTG
CAAGAACACGGAAACAAGAAACTAATTGAAGGTTGCAGAGTCATGTTTAAAGATGGGTCT
GACTTGTCTCTGTACTCGGGTAGGATAATAGAGTGTTCCTGGAACGCTCATGAAAATGCT
TGGATCTTTGTGCGGATCCAAACAGACAAATCAAACCCAGATCATATTAGTGTCTACGAG
GAGGCAAAGCACAGCATAGAGGGCAATCTTACAGAGGGTATCTTGTTAGATGAGATTGAT
AAAGTAGCAGGTTTACCTATATACACTGACTGGGTAAAACGACACAGTGGATCTTCTTTT
AGAAATGTATGGAGAAGGCATTGA

Peptide Sequence

PEP ID

XP_016502333.1
PEP Infomation

PREDICTED: mRNA-capping enzyme-like isoform X2 [Nicotiana tabacum]
Sequence

MEVVEGEQLKKRKQFGEYSMHVSSSSTHNNWRSRYYKPRKFFDRYSLPSGWLYCPPYGDN
IGFIIPSKVPLSESFDKNIPPGERYTPKELIDKQRCLGREIGLVVDLTNTDRYYPESDWT
SHDIRHVKIRCPGQDSVPDAESVDRFVSEIVQFTCQESQASKYAVVHCTHGHNRTGYMIV
HFLVRNQSVSVSEAIAIFSRARPPGIYRQKYVEALYDFYLQAKPEPLVCPQTPEWKRDAD
QDNDAVASSSGNLTKAGAMSDADFGGEPIPFAEVQRMKNFCYQVLNLHARSNTRSPGSHS
VSLNRDKLHLLSQQLYHVTWSAEGPRYMMLIDREGCYLIDTQFYFRKVQLRFPCKYIYQG
RADVTHRYTLLDGEMVTETEPETQVKRTIYLIYDMIAIDESSVSELPFHHRLMLIEDEVI
RPRNFEREFLFTCVNPYYQYDMEPFEVRRKDFYLMSAASKLIKDITPSLPHSTDGLIFQA
WNATYVPCEHDGRLKWKYPGKNTVDFLFEVGVDGSNLLYLQEHGNKKLIEGCRVMFKDGS
DLSLYSGRIIECSWNAHENAWIFVRIQTDKSNPDHISVYEEAKHSIEGNLTEGILLDEID
KVAGLPIYTDWVKRHSGSSFRNVWRRH

Transcript Sequence

Gene sequence data has not been registered.